| General summary |
|
| Average percent identity |
98.3 |
| Fraction of bases aligned |
1.0 |
| Mean read length |
1,623.2 |
| Mean read quality |
20.2 |
| Median percent identity |
99.2 |
| Median read length |
513.0 |
| Median read quality |
23.0 |
| Number of reads |
2,423,980.0 |
| Read length N50 |
5,578.0 |
| STDEV read length |
2,913.3 |
| Total bases |
3,934,707,451.0 |
| Total bases aligned |
3,800,259,209.0 |
| Number, percentage and megabases of reads above quality cutoffs |
|
| >Q10 |
2420486 (99.9%) 3932.1Mb |
| >Q15 |
2273986 (93.8%) 3718.9Mb |
| >Q20 |
1768692 (73.0%) 2949.5Mb |
| >Q25 |
842528 (34.8%) 860.0Mb |
| >Q30 |
330002 (13.6%) 153.4Mb |
| Top 5 highest mean basecall quality scores and their read lengths |
|
| 1 |
46.3 (72; 3b6d226b-d364-433b-ae41-f00820373190) |
| 2 |
46.3 (116; a1cde4f3-4ade-4f89-be61-ae3bb654f7a3) |
| 3 |
46.2 (143; 44b68710-35a0-499e-925c-e4f220f8c6d3) |
| 4 |
46.1 (152; e468618c-9c40-4611-b2c5-cbd5abdc633d) |
| 5 |
46.1 (223; 407b39d1-5e47-49f6-bf9e-d72d9cc8d10e) |
| Top 5 longest reads and their mean basecall quality score |
|
| 1 |
77857 (15.9; 1fd43462-d3dd-4088-8701-7a2a3a5ccf7e) |
| 2 |
72935 (17.3; dcfa6e2b-03f8-4a72-b447-05042d2b81cc) |
| 3 |
71823 (17.4; 122057c4-ae10-45b0-a83c-b652715ffd6e) |
| 4 |
70893 (23.3; 2901f882-dd1e-4457-ab76-9e3acdcb9eb8) |
| 5 |
68909 (24.0; 94510695-5396-4497-aa7f-017d9cb933ea) |